YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88657569, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCVTILGKI VVSIKSVLNK TFVSFKIFLL SFVVAFVSLS ILTYHENDLS FNLATDSPVR  60
   61 NLGGVVGSHL ADIFVQIFGI SSLIAIPLMV FCVVNILCRV NRNIYLYLGS SLMIMVGISG 120
  121 LVSNVSLKVI HKYYYGGVLG IYFQSCPIIV LLAIVLLGTA GIIGWKKIVY LYDILLKMFS 180
  181 RIIHKSNNIS DTVIREEISQ NVGQAQEYYN IEDSLDEREF TEEEEEIEED ELTKELIEEE 240
  241 IEEEESIEEF MEEEVEGEEL AEELDFPDEE EGLEFQVEED DDECEEEDEE SNYDEECHDK 300
  301 YDDKDDYIDD SNEKEIVVYK RPQATPQVVQ EKKKYKEFVL PSVDYLSKPN PVDKREFHPD 360
  361 DNVVNLLNKV LKDFSIHGNI VNIRYGPVVT LYEFEPSAGT KSSRVIGLSD DIARSMSALS 420
  421 TRISVIPGRN VMGIELPNHY REIVMLRDLF ESEQYRDSRL KLPIALGKGI DGEVVIADLV 480
  481 KMPHLLIAGT TGSGKSVAIN TMILSLIYSL TPDQCKMIMI DPKVLELSVY NSIPHLLTPV 540
  541 VTESKKAIAA LKWVVSEMEN RYRLMSDIGV RNIVSYNDKI KEAIDENRTL EKVLQTGFDK 600
  601 ETGEAIFERI AIEPSVFPYI VVIVDEMADL MLVAGKEIES SIQRLSQMAR AAGIHIIMAT 660
  661 QRPSVDIITG VVKANFPTRI SFAVTSKIDS RTILGEQGAE QLLGMGDMLY MVSGGRIIRV 720
  721 HGAFVSDDEI QNIVEYLRSQ GTPDYIEGIT RIQQDYDYCI DDNIPERDDE LYKQAVSIVI 780
  781 RDRRTSISYI QRQLRIGYNR AANLVERMER DGVIGVASAG KREILLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle