YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88601054, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRFFKSKSE AKQKVAHWYE EHVGRVTLQR NFLVVLNLGV IVALMLVVFA LFAVSSSRTI  60
   61 EAFVIEVSKK TGTIARVNPA TVKEYSANRA ITNYFVTQYV KAREVFHPAT YRYDYYTTVR 120
  121 VFSDPSLYTL FKGSLSLSNP TSPLNLYANV ADSKYEVRSI RHLDSDTVQM RITMRFVNSD 180
  181 GGVSVTNKIV SVRYSYMDLD LSEEDRRLNP LGFVVVSYQV DDDHS

Type	Start	End	Confidence
Cytoplasmic	1	31	0.94
Transmembrane Helix	32	54	0.93
Non-Cytoplasmic	55	225	0.95