YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88600990, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLESVVVHGV ADSITLFEVK HALHERGFAL LLLLFSLPLS IPLPVPPGYT TVLAIPILFF  60
   61 SVQIVLGCDS PWLPKFLGEK SMKRKSLAFL IEKTVPTLRK VEKFTRPRFP ILNNALGERI 120
  121 YGIISLMCAI SIAIPLPLTN FIPAGGIALM SLGVLNRDGI ISILGIITSF VGLFISALVI 180
  181 ILGQKMVVEL LSILGVKL

Type	Start	End	Confidence
Cytoplasmic	1	26	0.93
Transmembrane Helix	27	45	0.92
Non-Cytoplasmic	46	51	0.76
Transmembrane Helix	52	73	0.91
Cytoplasmic	74	119	0.94
Transmembrane Helix	120	142	0.84
Non-Cytoplasmic	143	159	0.80
Transmembrane Helix	160	182	0.95
Cytoplasmic	183	198	0.91