YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88600946, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVLAVVIG FFLLLNLSVF VVPEGYKAIV LQFGEVVTEK PLEPGLHFKI PFINKVIVID  60
   61 TRIQDLSSDS REVIAADQKR LIVSYYAKYK IIDPVQFYRS TRSIANLESR LAPVVEANMR 120
  121 EQIGLVPLVS ILTEERADVM NKIKLHSGNV ASDFGVAVVD VRIKRTDLPE ENSDAIFKRM 180
  181 QTEREKEARE IRARGYQEAQ KIIANADREK KVILTEAYAK AQSIKGEGDA EAAKLYAEAY 240
  241 AVDQDFYKFY RTIIAYRKVF SRGNTKFIIN SSDEFLATLK DVNEKK

Type	Start	End	Confidence
Signal Peptide	1	23	0.93
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	286	0.99