YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88600945, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSPERQAA FALCAFKAGI PVIFCSFSKV VVAAPRESCD VEGFFRNYGK VGVSLLLSAE  60
   61 RIGFHSGSSN NQSVRLSLKV VEELRLGLEL LIRLAETIPA SEEEELLVVL AKMAELLPEV 120
  121 LVSTLEFQER TDMLNFAFSN GLQVMDLDAI SRGLVQQHIT RVSEAKIRIR ENVDSYMVCY 180
  181 RSILKEHYAI IIGDPLSSKE PLVRVHSSCY TGDLLGSLSC DCRDQLHDTV KKIAEDPAGG 240
  241 IILYLSQEGR GIGLPNKIRA YNLQEDKGLD TVEANLCLGF KDDERDFRVV RLILKDLGVQ 300
  301 KVRLITNNPE KIRQLSSAGV DVASRVPILM RSNPYNHKYL QTKSEKLGHI FIA

Type	Start	End	Confidence
Signal Peptide	1	25	0.63
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	353	0.98