YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608759, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKGKLGVIL GVANDRSIAY AIGKICRENG AELILTCPTD QFKKRLGPIA EEFGGSALVC  60
   61 CDVSQESQVE ELFRFIKEKY GRLDFVVHSV AFSDKEELQG DYINTSLSNF LNSMHISCYS 120
  121 LTSVCRYALP LMKESGGSVL TLSYYGAEKV IPHYNVMGVC KAALEASVKY LAVDLGKYNI 180
  181 RINTISAGPI KTLASSAIGK FSYILKWNKH NAPIKRNTTK EDVAGAALYF LSDLSGGTTG 240
  241 STLHVDCGYH VIGMRAVELP SDIMT

Type	Start	End	Confidence
Signal Peptide	1	21	0.52
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	265	0.99