YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88600901, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGFFILVGL CLCFCKSFFK QTLAEPCRKD YNRPMLVHFG FAYRDMDYRI ETDSIGSIKV  60
   61 PQDKYWGAQT QRAMENFKIG TEKVPMEVVK AIAIIKLAAA RTNVKAGALS KDYLGAIEEA 120
  121 CHEIIDGKLD DQFQLSVWQT GSGTQTNMNV NEVISNRAIE KFNGVIGSKT PIHPNDHVNM 180
  181 AQSSNDTFPS AMHIAAVEKV LKKLLPSLFY LVEVLSEKIK SFSGIVKIGR THMQDAVPIT 240
  241 LSQEFSCFCE QLNKSASRLN ENLSRLLEIP QGGTAVGTGL NTRRNFDHEI VAEIARITSI 300
  301 EFTPAKNKCE MLASHDTLVE LSGNLNTLAV SLMKIANDIR LLGSGPRCGI GELILPMNEP 360
  361 GSSIMPGKVN PTQCEALTMV CAQVIGNHSA VTVAGAGGQL QLNTFKPMII YNLLQSMDLL 420
  421 SDGMISFGEK CVMGIVPNKK RIDNMLQESL MLITALNKEI GYDNAAKIAK FAYSKDCTLK 480
  481 EAAMELELLS EDEFDRIVNP AHMLGPDQQE KTGPA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle