YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTH_NEOSM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEFRTFVLC GLGNPGLRYA QTRHNLGFML IDYVRYTFSF PEFLPKFSGL LSSGRVSSFL  60
   61 LYLFKPVAFM NNSGRPLVQL VNFYKVELEN VIVFHDDIDL DFAKVKIKRG GGSGGHNGLK 120
  121 SLDFNLGRDY WRFRFGVGRG VGDPAEHVLS RFTALELERL NKLFGFIGTN LPLLLSDIAT 180
  181 RKEKFLNEYK CCSQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.49
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	194	0.96