YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FABH_NEOSM
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTNFLSFG CYLPKKVLTN FDLEELVDTS DEWILRRTGI KTRYIAEEED VCELAFRASL  60
   61 NCLERAMHFS QKEVDAIIVA TCTANKRLPA VANMLQARLG IGRHILSFDV NAACTGFLYA 120
  121 LSIVDAMIVS GKVSTVLLVG AEAMSTIIDW NDRNTCVLFG DGAGAVLVSA GDSGGVLYEH 180
  181 MACDSSLGEA LLAEVGGTLK MDGRSVFEAA IKRLTLAIGE ALKTTGISVE ELDYFIMHQA 240
  241 NIRIIELIGE KIGIDRSKII VTVDRYANTS AASIPITLAY MDSHGSIRKG AKILFAAMGA 300
  301 GFTYGVTIFE Y

Type	Start	End	Confidence
Cytoplasmic	1	289	0.51
Transmembrane Helix	290	308	0.53
Non-Cytoplasmic	309	311	0.82