YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88600781, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQFDISTYF GQIFWFCISF LFLYCFVRFI FVPKFNALLN VRASVLKENR KLIAKMKEDL  60
   61 EHLESVWNAA LSDARFAAEN ILRDAVISVE ELRGGVAERL AVLNSELREE NKVLIDAFFA 120
  121 QKLLELEELF VKLVEDYYVV IYTPFVVGSG GVHVESVRKK ALEDFACLYE RLRGCR

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.67
Transmembrane Helix	12	32	0.94
Cytoplasmic	33	176	0.78