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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88608549, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKKSTILV IGAGPIVIGQ ACEFDYSGTQ ACRILRKCGY KVVLINPNPA TIMTDPDTAD  60
   61 VVYIEPINIG IIERIIAIER PDKLLPTVGG QTALNIAIEL FDRGILSRYG VELIGASKRV 120
  121 IENAEKRSVF NRLMGEIGLQ VPKNTMVTHV NEIEKAFEFI GVPAIIRPSF TLGGLGGGVA 180
  181 TTKFDFFTII NNGLKFSPVS EVQVDESVLG WQEFELEVVR DSVGNSIIVC SIENTDPMGV 240
  241 HTGDSVTVSP ILTLRDEEYQ EMRDAAFKVL DCIGVTTGGA NVQFALNPEN GELRVIEMNP 300
  301 RVSRSSALAS KATGYPIAKV AAQLAAGLTL PEIYNDAVPT IPASFEPAMD YVVVKIPRFN 360
  361 FEKFFHAEER LSSSMKSVGT TMAIGRCFQE ALQKAFSSLE QGLDGLNTVL DLNVSRKVIE 420
  421 RKLRSLIPNK ILVIADAIRA GFQIKEIVYL SKYNEWFLLQ IDELVNLENE IKSGNFSPNR 480
  481 LLIWKKKGFS DSRIASLKGC DEAFVRSTRK KMAIRPVFKR VDTCAAEFES DIKYLYSTYE 540
  541 GDTVTQPECE AYPSDRKKVI VLGSGPNRIG QGIEFDYTCV HAISAIKELG YEAIMVNCNP 600
  601 ETVSTDYDIS DKLYFSPMNV ESVLDIVEKE SERGELLGVV LQCGGQTPLK LARAMHENNV 660
  661 RIIGTGFASI NTAEDRKSFN SLVAELEMLQ PENAIVLARE EIAKNVKKIG FPLIVRPSYV 720
  721 LGGESMQIIY DDAMLEDYLE RHTQLFSGSS LLLDKFLVNA LELDVDAISD GEDVYIAGIM 780
  781 EHIEEAGVHS GDSAFVFPPQ KLSEEILERI KSCTKKVAIA LNVVGFLNIQ FAIDGRDVYV 840
  841 LEVNPRSSRT IPFVAKALGI PVARIATKVM LGMKLRDFQL KGYEDYVKHV FVKQPVFSFE 900
  901 KFPESDVLLG PEMKSTGEVM GVGDDFDTAF AKVCMASMRK LPTSGKVFFS IRDEDKLKSV 960
  961 EVAKILSELQ FTILATKGSA AFLEKHNIDA VTVNKVKEGS PHVVDMIMNS EISLVINTSS1020
 1021 HVLESVRDSM SIRSSSIINQ IPCCTNIHSA LALVRGIKKI VKCKLPVYQL SYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle