YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608417, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.68
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVILKVFRMK RTFLWCFMLC CMFTLVSPVA AAEQTKDDSI VSRVICNIVT QLSGPISQAI  60
   61 ATLVIIITGY SFFVGKVSIG MLFIVAAGIM FVFGAQTIMG WILGTDYKCT GGQVAGGGKS 120
  121 T

Type	Start	End	Confidence
Signal Peptide	1	31	0.69
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	53	0.92
Transmembrane Helix	54	74	0.81
Cytoplasmic	75	80	0.70
Transmembrane Helix	81	103	0.87
Non-Cytoplasmic	104	121	0.87