YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608176, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITTFFWIGY LPEWQSHWVA FFSIPLALLV LYFTIGFSVP TVLAAQVLLI FSLVLLFLGL  60
   61 IGIYFFQKTV FSESRYEITI HVAFGQCLML ALSVPAIIKT LTQIFLFNSF ICAHFLNCAD 120
  121 WFLRCSTYFI TALVPYFVFR LIDITKPWPS YWIERDYNNA FSNMLEGFFN AIYASALFYA 180
  181 LNFILFNLLL IDVVEFYKQV FSGVFINRGI PWVYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.50
Transmembrane Helix	16	37	0.90
Cytoplasmic	38	42	0.42
Transmembrane Helix	43	66	0.89
Non-Cytoplasmic	67	77	0.48
Transmembrane Helix	78	102	0.79
Cytoplasmic	103	120	0.39
Transmembrane Helix	121	142	0.73
Non-Cytoplasmic	143	168	0.68
Transmembrane Helix	169	191	0.84
Cytoplasmic	192	215	0.68