YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608155, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSLPLVYT DLLVLGLVMS ISSFCSLIKK LEEYWSGYGC SVLLPYTSEL GAATLHPATI  60
   61 FSSISAKDVK IAYVQPVIRP ADGRYGKNPN RLYQHHQYQV LIKPSPDNLQ DLYLDSLKHV 120
  121 GIDIRNHDIR FVEDDWENPS VGAWGMGWEV WCDGMEISQF TYMQQVGGIA LSSIPGELAY 180
  181 GLERIAMYMQ DVDNVGSLFY SKDTVKYMQV YGENERQFSI ASLESYDYEL LLSQFNDNVA 240
  241 QAKIFIERKL PLAAYDHCIK TSHILNLIDS RGFISVSERA KYILDIRGLV KQCCELFIEQ 300
  301 EGSYA

Type	Start	End	Confidence
Signal Peptide	1	25	0.65
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	305	0.89