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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYT_NEOSM
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVVLTVTL LSSSFSLSSG KTVGSVISDF DAEIFSKTIA ASVNGVSVDL SYRLDCDANI  60
   61 EPILLESEAG IEILRHDCAH VMAQAVQELY PETKLGIGPV IDDGFYYDFS TPIAFSDSDF 120
  121 EKIEEKIREI IQRNYRIIRE EWSRDDAVSF FQKKGEKYKV ELISRIPPEE KISIYKQGDF 180
  181 IDLCRGPHAP STGWLKHFKL LKVSTAYWLG DAKSDSLQRI YGTAWATKDG LEAYLSFLHE 240
  241 AKKRDHRAIG KTMELFHLQE EAQGQVFWHE NGFILYRVLE NYIRNKLKTH GYREVKTPLV 300
  301 YNKCLWERSG HWSKFKENMF VIRSDDGEFS LKPMNCPAHI EVYKQSLKSY RDLPLRLAEF 360
  361 GMCHRNEASG ALHGLMRVRG FVQDDAHIFC TPQQICDETI AFCGLLKEVY RDLGFTEVEV 420
  421 RFSDRPEVRL GNDETWDKAE IALKSAMDKA GLIYTLNPGE GAFYGPKIEF VLVDALKRKW 480
  481 QCGTLQVDFV LPERLDATYI DHEGKKQHPV MLHRAILGTF ERFLGILIEH YDGKFPLWLA 540
  541 PTQVAVLTIT EKVEEYAKSL LNHLSKTGIR AVSDFSNQRI DYKIRYHTTR RVPILWIIGR 600
  601 IEEKSNSVTV RRMGSSESEV KTVDTALGDI LREFNVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle