YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608119, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRCLCVLSF SCFLFMRSPL SPSLFAYRFP LAAILSISHR LSGAFLFFYT GFFSWYVFAC  60
   61 FYMPSSFLHT VLSPFFSGYL AGFLLCFFLF FFCYHLCSGV RHLFWDFCTG LSQASVKVSN 120
  121 FLVIIAALLL FFLMFSLTYL

Type	Start	End	Confidence
Cytoplasmic	1	40	0.37
Transmembrane Helix	41	65	0.77
Non-Cytoplasmic	66	74	0.46
Transmembrane Helix	75	98	0.88
Cytoplasmic	99	115	0.50
Transmembrane Helix	116	139	0.86
Non-Cytoplasmic	140	140	0.55