YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608100, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRGKSSIVL LAFLLINFFQ LLLYKQILNC SMDGPLLWIT TNILHLVSVS GIFSQYWATG  60
   61 SLEQLVTFTP GIRSFIVKTV LGLWIRQGLL LTLLATGLFY LLSTDKIHTP TIILFAGSLC 120
  121 YSTGMLSFTG ALCSSLSIRS DRITPIILAA PISIPGIVTA LALLKWGINS PGIFSALFFG 180
  181 NVIAVLLSPL VMEIALKETL ENL

Type	Start	End	Confidence
Cytoplasmic	1	6	0.94
Transmembrane Helix	7	28	0.89
Non-Cytoplasmic	29	35	0.91
Transmembrane Helix	36	59	0.82
Cytoplasmic	60	81	0.81
Transmembrane Helix	82	102	0.92
Non-Cytoplasmic	103	111	0.78
Transmembrane Helix	112	133	0.94
Cytoplasmic	134	142	0.84
Transmembrane Helix	143	164	0.92
Non-Cytoplasmic	165	172	0.73
Transmembrane Helix	173	192	0.93
Cytoplasmic	193	203	0.81