YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608089, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRVVVTGL GLLTCLSSTR ERSWALILES RSGVRALSTI ETEGLPVTIG GEVLENGEDG  60
   61 FDCKKFSDPR KHDRYISYGI AASREAVQHS QLLEYPSLDK RRVGVSIGSG IGGLPLIEKN 120
  121 SILLREEGIR KVSPFFIPAS LINLTSGNVA IENGFTGPND ALVTACATGA HAIVNSWRII 180
  181 ANDEADVMIA GASEGALCRV GIAGFANMKA LSRRNDEPEK ASRPWDVDRD GFVMSDGAGV 240
  241 MVLEEYGHAK RRGARIYAEL VGFGVSGDAY HVAAPNPNGD GALAAMASAI KMAGIGLDEI 300
  301 DYINAHGTST PNGDAAELNA LRRLFGSSLG MGVSSTKSSI GHALGAAGGI EAVLCVLAMR 360
  361 DSVMPPTLNL DKPDDCASGF NLVPHTSQEK NLRYVLSNSF GFGGTNVSLL FGQYS

Type	Start	End	Confidence
Signal Peptide	1	25	0.89
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	415	0.95