YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608079, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKISILGST GSVGCQSVDV VSRFYSGTIK VDALSCNSNH ALLIQQARLL SPQKVFVADE  60
   61 SSYKEVKTAL GSQNIEVILD RGVEIGAALC DNDMLVVGIS GIAALNPIYS AISQGIKVAT 120
  121 SNKESLVCGG SLLLPFVDKI IPLDSEHHAV AKLLRSKPIM SVSGITLTAS GGPFFRKEKR 180
  181 NVTVACALAH PIWKMGKKNS VDSATMMNKV LEVVEAHYLF RIPKEKISVL IHPEALIHGM 240
  241 VDFLDGSQHA FISLPDMRIG INNALAGLVG GGYESTYTYG RVPLATRKLT FYAAKEEEFR 300
  301 VLKFLGTDQE IVLSAVNDLA VEDFLAGKLD FHSIPDFISS GLDKFQYNKA DVKNIGDVFS 360
  361 IYDKAQRVCR SDNSGSFVTK GYHPLVSGV

Type	Start	End	Confidence
Signal Peptide	1	17	0.80
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	389	0.99