YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88608055, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSNNFAIL LTLQFMLCLP VFADQKAHSL ASTPHIKEMV YNPNGIHTYT GFFGYQSSIV  60
   61 FEDGEVISTI SMGDSTGWQL DTQGNRLFLK PVEDNATTNV TILTSKRVYH FVFNAKEARD 120
  121 VYDPELAYEV RFRYPSHAVS IQSAGITGVQ NETVGSTELD IGKKAYLNFE YKLSGYDAIK 180
  181 PLKVFDDGRF TYMQFPSVNA NLPAVFRVDS QGYEALVNYH ISGKYLVVQE VAPLFTLRHG 240
  241 NDHVCVFNMK AAIKKRKGST KVFTNG

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	266	0.99