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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88600176, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQLRNIITI FFLLAFIFAL ALYMSAAIFV VAVWGIEHLN FRDLQPSLDG FPTRLWPTIF  60
   61 VYISDLFNNW DAWAPAVKIK LAVSLGIPFG ILGVVFYMLR APIMEWRPFK KKESVHGDAR 120
  121 WATEREIRKI GLRSRKGILL GKDKKGFLIA GGFQHALLFA PTGSGKGVGF VIPNLLFWED 180
  181 SVVVHDIKLE NFTLTSGYRK KMGQKVYCWS PADPDGKSHC YNPLDWVSSK PGQMVDDVQK 240
  241 IANLLMPEQD FWVNEARSLF LGVVLYILAV PEKVKSFGEV VRVMRSDDVT YSLAVALDTM 300
  301 GKKIHPVAYM NIAAFLQKAD KERSGVISTM NSSLELWANP LIDTTTATSD FNFMKFKREL 360
  361 TTVYVGLTPD NLTRLQPLMQ VFYQQATEFL CRHLPQKDEP YGVLFMMDEF PTLGEMEQFK 420
  421 TGIAYFRGYN VRLFLIIQDT EQLKGIYEEA GMNSFLSNST YRITFAANNI ETANLISQLV 480
  481 GNKTVAQESL NKPKFLDLNP ASRSLHISET QRALLLPQEV IMLPRDQQIL LIESTYPIKS 540
  541 KKIRYFEDSF FTKKILDPIS IPTQEPFDPK KFEEKMRKER EAKELEENAP LAIDEDQALL 600
  601 EDESLLDDSD YEDGDFEDLD EEEDLSDFLD DTDEENEENM V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle