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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88607976, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFLRGILL LLALNLLDNN ILLLKSGFFF SHAYAEEVVL PKVMPGEASY PECGTDVAFA  60
   61 LIGLIAGIVA GIMIIVGSGG IIVAVGLGLI AAAVVSAMQL VGCLWSFVRN PVLRTRTGYY 120
  121 KYCQDEGAGA EVCSDEKMVY CEKKESNEIN SNAGGCTYAW PRNRAENGKY IEICYREPFD 180
  181 WGYISRAGQE TQLDSRESSF TAINLGVLGG ENKIQSLDTL IDMKRKVSVR SIQCVTLKNM 240
  241 ESRRIGPYVF SAEYDGSKLC GYVTFSRRAK VGCHLRDPAD PSPMCIKSKP IYDPDDLSRV 300
  301 LSYDNSGCFS CYISSACYGV TGLIAKAQFP MTSLVVQCIR ESLRNILVSD CKESEGFLVI 360
  361 AQKKLKAAVE AVLVLAVLLF GFKLLSGGVS GLQEWTMFVL KIAAIAYFTI GDGMIVYYDR 420
  421 LLTLSTGLAD IVYSGGGKKD VCDFDSSEYN ELVVTKPLSA EERGCFEAFV KSGHKRDFAE 480
  481 LKKFIDSGVL SCSSLKLGQG GNLPIFSKLE LKNLSYMTLW DRLDCRVAFY LGSALGNPTV 540
  541 AGGGVATVIT AGAISALGAG IYMVPVLILA FFFAGQLVIA LLVLMYVILM FLIILWIVHL 600
  601 FILAIIALTI LILFSPIFIP MILFQVTKPF FEGWLKEVMA YSLYPIVLFG FLALVFSVFD 660
  661 KLFFDDLTFQ RVSKLDGVRS YYSYKLANPN QCKEKNADGE LRDSSVLACV IQEMSLTQKP 720
  721 LLFGIYVTTI ASDPSSTSVL WIKLGMMALM LFLFFHFLGI LGGLAAELVG NFRADLSRHV 780
  781 SSPQSMAKKL AAISLNTSKT LVEGGKNIGK KLGGKRAGPE GSGDQTVKAK TLVEGGKNIG 840
  841 KKLGGKRAGP EGSGDQTVKG AGEGGAGGMG GAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle