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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88600144, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTKVRIRAG GVAVPNKGFA LVCLLLLLCL SGCAGDCISG ASSNDVKKGT LRVCPNPGDV  60
   61 GDRNCLEYMG VAEGEVPDAR THWVNVGINL EKGDIFEYQI KRSDDYSLCY PPCPDDCLNE 120
  121 NGENLCDTPS CRWVDLEFPG GKAEVDLNLL EGDEVLIGLR PALESGLISN DICAGKDARI 180
  181 YPGNYQECMK HRGEPYGGLF APGINLVVDK KGALDKFKVV YSLNGGIDRS IGTVDLCRAV 240
  241 VFGESLDRYS KEVENLSKRV PGIALHRYCK ALIEQTGQFI KRNEALVEFE GKDLVLRWLH 300
  301 LYLKDDSGQL SYLCYDDKDI PGLCRASNDD YFFNRTTVPL NKFFRVSSRS FKSMQLQFSS 360
  361 LDETVAQNGI FKLKVSRKCD IPDFKGVKVY ISEEDPNFEP SVQGEGGAFL VPDSTNIIDR 420
  421 KGSMYVGIVD QRGDGKAESR GYISLHYVLK RQNGIKLFSK ATNSVKSKII RILYGKTVDE 480
  481 YGRFSEGDDV AGAVGGVYKA VAGSTLTIAV QASIVLYIVI YGLAFLFGLV RTPQVDLVIL 540
  541 LVKLGIIAVL FGPNSWKFFN ENLFQLFVEG SGQLINYFSG NMNGVDFAFL DKVLAPFSTQ 600
  601 ENWLRIFSFL FSGGLGILYF LLIIVGLIQI FMAMLKIIVA YVMSLVMVAI LLCLAPIFLS 660
  661 MIFFKRTKSI FDNWIKNLAQ VAVTPVITFA AFAVLAEVGL GIIYALFDFQ ICPRCVIEPD 720
  721 FALFRFCLLA VYLPTSYDFG GIMVAQNAGG MPVGISLVVS FIVISNAVVA FTSRAAILSS 780
  781 SIFGAIASDA TVPAEQFMDS MKAIVGQDAQ TQYQKAHIRH TKELDHEKDE PEKPPKRNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle