YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88599005, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLDMFGLGK EKKKPVTGSE RDCVSGKIGD WYHDRYGSVV VQRNILLLLV VLSVFCIAVS  60
   61 TFVIFRIGKT RTIEPFVVEI EKKSGITTLV NPMTVKQYSA DEVLSNYFIV EYIKARELYD 120
  121 PNNFQYNYYT RVRLLSSQET YSEFRSWIRP SNPSSPMTLY SDVVSGALKV RSLQHLEGGQ 180
  181 VQVRFTMEFV NHSGSIVKRD RIATLSFRYS SLEMTEQDRQ VNPLGFQITY YRADDEFL

Type	Start	End	Confidence
Cytoplasmic	1	44	0.67
Transmembrane Helix	45	65	0.96
Non-Cytoplasmic	66	238	0.69