YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88598986, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDDIASGK SEGFAGEVQR RDFLGLTTLF MSFIGIFSFL YPLFRSLSPS AEVMAQSTVE  60
   61 VDLTSIKEGS TKVVKWQGKP VFVRRRTKEE IEKARAVDIS GLRDPQTDQQ RTFVGKEEWL 120
  121 VMVGICTHLG CVPTEVKSGD KGWYCPCHGS KYDTSGRILA GPAPLNLPIP DYHFVDDSTM 180
  181 VIGKKGTAV

Type	Start	End	Confidence
Cytoplasmic	1	22	0.85
Transmembrane Helix	23	44	0.91
Non-Cytoplasmic	45	189	0.88