YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607903, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKERYSQQVL VPEVGAQGQK RLLSSSVLVV GCGGLGSTTI PILAASGIGR LVLCDDDTVK  60
   61 ISNLNRQTIY REEDIGLSKV DVATRFVNKL NRDVEVIGLK AAIGPRNFNT VLNDVDIVVD 120
  121 CVDRLAVKLF LNDACVAKNK VLIHSVAIGF VGELMVINPG KSPCYRCFFE QQPVSTDLNC 180
  181 ARAGVIGATV GVVGSMAAGE VIKHVIGVSQ PNTGKLHRID LLNHNFTTYE FSKNPKCMCC 240
  241 GTDSTTDPYD LESYEGKLRQ HE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.57
Transmembrane Helix	21	43	0.53
Non-Cytoplasmic	44	262	0.91