YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88598908, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRRPVLSVR GGIRGALGKN IHIISSLLVH LVMGVFLVVR TSPPESYGVS TASCCPNCDG  60
   61 VAIKSQARTA DVDYITSAGS QVANLVNSTE DVQRSGLFTK PGIQPPSQTS KKPARMSLAR 120
  121 SDIAVNTLAS QEDLMVVQPV YEYEQQSGAR YTNPHKKGFF GYSKSIFQNV LNNHAPEEVV 180
  181 DSLSEQFAKC WTIPAGIDDD SNAVVKIKLA MDPSGKVTTA TISDTNLYDN DPLYRALADS 240
  241 ALRAVHKCNP ITELRGTDYS IWNEIVLTFN PQQVS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.89
Transmembrane Helix	21	39	0.94
Non-Cytoplasmic	40	275	0.99