YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MDH_ANAPZ
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSHRSVKVS LVGAGNIGGT LAYMLGVAGI CQELVFVDVM DGVPRGKLLD IGHALAISGV  60
   61 DITAVGGSDY AAIEGSDAIV VTAGLPRKEG MSREDLLMAN AAVIKGVAEN IRKYSPDAFV 120
  121 IVVTNPLDAM VWYMHQCSGL PVNKVVGMAG VLDSARFSFF LAKHMSVSVS SVSSVVLGGH 180
  181 GDLMLPLLKY STVGGVSVSD LISCGRLSSE DVHAIIERTR KGGEEIVKLL KSGSAYYAPA 240
  241 ASCMNMLESY LFDKRCVIPC SVGLDGKYGV NGGLFVGVPA VIGKNGVEEV IEYVLSQEER 300
  301 EIFEKSVGLI SNSVKIISEQ K

Type	Start	End	Confidence
Cytoplasmic	1	8	0.61
Transmembrane Helix	9	30	0.59
Non-Cytoplasmic	31	321	0.86