YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607760, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVFCLLSL VVLVASFPLI SRWVSGVKNQ NQQEIEAMIE EYIYKNPHKV VSALSKGQVA  60
   61 LNKAEMRKRV LENKDLLEDT SYPLFGNKKG EVFLVEFFDY SCGYCRTMLP QIKEILADGR 120
  121 VGVMLRDLPL LGEASMLAAR AALAVHFINP EKYIDFYYAA LVHNKMFSET EIADIAESIG 180
  181 ISWEELERSL VQNDERISKM LADTKTLAAN LNVSGTPTIV VGDSVFVGAS DLQSLRDMIQ 240
  241 SAIDAKNK

Type	Start	End	Confidence
Signal Peptide	1	26	0.90
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	248	0.99