YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88607694, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGKVRRRKK AVPSAVVAEE ATGSGSEEGR ILNLCELKRK STGELLAIAE ELGVVSNGRM  60
   61 LKQEIIFQLM KRVISEGGVA IGGGVVETLP DGFGFLRSAE ANYAASSDDI YISAGQIKKF 120
  121 NLRTGDIVSG EIRAPGDKER YFTLVKAYSI NYTEIGKLQR YVHFDDLIPV YPEDRILLEC 180
  181 NKGAGNEKKD ISMRAIDIIA PLGKGQRALI VAPPRVGKTV ILQQIAHSIA VNHPNMELIV 240
  241 LLIGERPEEV TDMLRSVKGE VVSSTFDEPA YRHVQLAEIV IERAKRMVEH KKEVVILLDS 300
  301 ITRLARAYNE VMPSSGKVLT GGVDSNALQR PKRFFGAARN IENGGSLTII ATALIETGSK 360
  361 MDEVIFEEFK GTGNCEIILD RKIADKRIYP AIDISKSGTR KEDMLIESAL LKKVWLLRRL 420
  421 LSAMGPVEAM EFLRDKLSMA KDNNDFFEMM NS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle