YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88598480, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVHKDAVK VLILGSGAAG CTAAIYAGRA NLNPVLVTGM QPGGQLTITT DVENYPGFSA  60
   61 IEGPKLMEYM QEQAVKSGAT LLTDEISEID ASVYPFKCTS MFGETLQAYS IIVATGAQAK 120
  121 WLGLESEQNF KSKGVSACAT CDGAFFKDEV VAVIGGGNTA VEEALYLTRS SKKVFLIHRR 180
  181 DKLRAEAVMQ QRLFSNSKIE VIWNSVVKEI LGDSEGKKVT SLLLQSTVDS TESLLDVGGV 240
  241 FVAIGHTPNT QVLKNMLGAK VNLDDEGYVI TAPGTTITSC PGIFAAGDVC DKVYRQAVVA 300
  301 AGSGCMAALD AEKYLAEKGI E

Type	Start	End	Confidence
Signal Peptide	1	23	0.64
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	321	0.98