YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607394, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHINYIAFA FFASIGLFIV VTSGSRIKQL MGLGIFQTSV LIFYVSLGYV SEGIAPIVSR  60
   61 GDAALSYSNP LPSVLMLTAI VVGVVTVAVG LAIVVKIEKS S

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.89
Transmembrane Helix	6	25	0.92
Cytoplasmic	26	32	0.76
Transmembrane Helix	33	55	0.82
Non-Cytoplasmic	56	73	0.85
Transmembrane Helix	74	95	0.95
Cytoplasmic	96	101	0.88