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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88607372, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFAYSWLLD CLDAGCSAQV LVDELSSIGV EAALVEGGVK QGSFVVAKVL EVLAHPDAHK  60
   61 LKVCKVYDGV EVLQIVCGAS NVRSGMITVL ARVGAYIQES GITISKAVIR GIESSGMLCS 120
  121 LEELGMSSSW DPSSGIVDLS ESSEYAVGED FIPQEEIIEV SVTPNRGDCL GVYGIARELA 180
  181 AAGMGSLKEL PVVGGDAALC KPSFALDMRV DGLIMGCSIK SISNKSASPR WIRERLLAAG 240
  241 VKTVSCVVDI VNYVMMLLNR PMHVYDADKI KGAALIVEKV ARGDCIAING KKYELAGDVV 300
  301 IRDADGIVHC IAGIMGSEQS KCTSDTENIF IESAWYDPVD IALSSRRLRL NTDSSYRFAR 360
  361 YVDPKLVGFG LNYAAYLISK YCGGEVSEVV ISGSAPNKAA HIEFDPEIVS KIGSVSIDRE 420
  421 RILSILESLG FVIDAASGEL WRVEVPSWRN DVSSPHDLVE EVLRIHGYDA IQEQEVLPAR 480
  481 VLERKANAVD DSLNNRVRAS MLSQGLTEVI TWSFLAGAVV EKMGFSVEDL YIDNPISNQF 540
  541 NVMRPSVLPN LLQVVSNNQA CGRDSISVFE LGDVYIALDR SDCVVCGVRA GNDLPRNPHA 600
  601 SIRKFDFFDV KADIERVFLQ FGISEADLEF RASTRDYLHP SRSADVYCQG LLCGYVGELH 660
  661 PSFVEFFELK DKVACFEVFL SGLSSQEEKV RGGFFLNKYQ VVKRDFAFIL DKEIKARELV 720
  721 TVIKAVRYVE DVSVFDVYSG VNIPEGKVSI AVAVVITSGL GTMTEAEIKE VSDSIIESVK 780
  781 RELHGQLRLE SA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle