YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607251, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEPKLPPVP VAVIMGSKSD LPTMSAAISV LDELMIAHEA LVVSAHRTPE RLFNFAKSAH  60
   61 ETGFKVIIAG AGGAAHLPGM VAALTHIPVI GVPVMSECLK GMDSLLSIVQ MPKGTPVATM 120
  121 AIGPAGAFNA AVLAASIIGL WDENVSLRLQ NWKQKITDSV SITPY

Type	Start	End	Confidence
Cytoplasmic	1	65	0.85
Transmembrane Helix	66	87	0.85
Non-Cytoplasmic	88	119	0.83
Transmembrane Helix	120	141	0.91
Cytoplasmic	142	165	0.87