YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607225, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDHLLKIEA LASRVSMWRA LFFVVLGLLV VFASQVDYSR FSFADIAGGA GGYVARIGIE  60
   61 GTIGRNKDRT ALLSRVEDDS SIKAVVLRID SPGGTVGDSE ELYRQIRAIA EKKPVVAVMG 120
  121 NVAASGGYMT ALAADHVIAN NGTITGSIGV LTQYVGVARI AERLGITLKT IKTSELKASM 180
  181 SPLEEMSKNS EDVMHELIKD FHHFFVSMVA ERRGLSEEEA YKVADGRVYT GAQALQVKLV 240
  241 DELGGEREAL EWLKSHHNID TEKVVVRDLE YQSRLSLMGG LRMLLESFKQ PLYALLFE

Type	Start	End	Confidence
Cytoplasmic	1	14	0.79
Transmembrane Helix	15	34	0.75
Non-Cytoplasmic	35	298	0.59