YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88598273, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDVGEYSSV LIFFSLAAVL SSLFAVLPIF LAKRRDSMEK LVPYECGFDQ KEEVSSVFDI  60
   61 KFCIIGILFV IFDVEVTFLF PWSVCLGSIG FAGYFSMLCF LGMLTIGFIY EWNSGALEWE 120
  121

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.86
Transmembrane Helix	10	31	0.95
Cytoplasmic	32	59	0.90
Transmembrane Helix	60	82	0.80
Non-Cytoplasmic	83	89	0.66
Transmembrane Helix	90	110	0.93
Cytoplasmic	111	120	0.80