YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607164, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEIAESAVH IQNGVSAFDV FAEASIVVRL VMLVLLAFSL VSWAIIFKKC FVINRHKREL  60
   61 HDVEVVFNSR GTALGIREIV ECGSGVVAKI LQHGIKHAQQ LHNKKEGFHR AINSELTRAV 120
  121 DKLEEQLGLL SAIGSSAPYI GLLGTLWKVI ESFRAVSIGE SQQIASVLYP YMAEALYTLA 180
  181 LGLLVAIPAQ LFYNGFSAYV TKLSHRLGNL VYELSAFVTN EECASDSSFE SRDS

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.91
Transmembrane Helix	26	47	0.94
Cytoplasmic	48	126	0.95
Transmembrane Helix	127	147	0.83
Non-Cytoplasmic	148	174	0.79
Transmembrane Helix	175	196	0.86
Cytoplasmic	197	234	0.86