YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607145, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTGFAKFVL GVGLACVIAI VSGSVFVVDE AHQAIVVQFG RISKSVQNSG LFFKAPIISK  60
   61 VIYFDKRIIE IRSDSCEVIA ADQKRFVVDF YAKYRIADPV KFYRTVRGEI GLENRLGSII 120
  121 ESNLRERVGR VALINFLNEA RSGVMTQILE GVSSESEKFG IEMVDVRIKR ADLPEENSAA 180
  181 IFRRMQTDRE KEAREIRAEG EEISQKIRSD ADLQKRVIVA SAMNEAQVIR GEGDAEASRI 240
  241 YNDALAVDPD FFNFYHTLKA YRQVFAGKDS TKIVLSPNND FISLFNKKNG G

Type	Start	End	Confidence
Signal Peptide	1	23	0.90
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	291	0.99