YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88598192, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIFPNLLT IFRVLAIPAV VASFYINYGA CTQYVTLLIF IFACVTDFFD GYLARMWGVQ  60
   61 SRFGRIFDPA ADKLIVLSTF VMLVYTNKIT GIPVLFVIII MCREVLVSCM REFLIAANIS 120
  121 VPVSEVGKVK TVMQMIATAL LILNYEFIVR LGEIFLCIAA ILSLHSMCLY TRNAIMETNK 180
  181 K

Type	Start	End	Confidence
Cytoplasmic	1	8	0.92
Transmembrane Helix	9	28	0.93
Non-Cytoplasmic	29	33	0.76
Transmembrane Helix	34	54	0.89
Cytoplasmic	55	73	0.77
Transmembrane Helix	74	100	0.70
Non-Cytoplasmic	101	146	0.63
Transmembrane Helix	147	171	0.79
Cytoplasmic	172	181	0.82