YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88607073, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAKKEDFHT FGNGVGSAGT GGVVVSASML SADFSNLREE IAAVSTAGAD WLHIDVMDGC  60
   61 FVPSLTMGPV VISGIRKCTN MFLDVHLMIN RPGDHLKSVV DAGADMITVH AESEVHLCRL 120
  121 IKQIKLYGKK VGVSIVPKTH HSVLEYIIHD LDVVLVMSVD PGFGGQAFLE PQLKKIEHIR 180
  181 KMIEESSSTA KIAVDGGVST DNARAVIEAG ANILVVGTAL FAADDMSKVV RTLKSF

Type	Start	End	Confidence
Cytoplasmic	1	9	0.65
Transmembrane Helix	10	30	0.70
Non-Cytoplasmic	31	236	0.72