YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88607065, gi|...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSISGLAR LCKIGATLLR YGIIPNAGIF SNRKHKKNYG ERVHLCLRSL GPTFIKFGQF  60
   61 LASRADIVGE EVAGNLLTLC DKLTPFPYSQ VVSIIESQFH KKMDEIFLEF DEEPVAAASI 120
  121 AQVHRARTLD GELKAVKVLR PGIEASFRAD IALMRKIADI SSALGILSRF KLPQLVEMFS 180
  181 DICKLELDLR FEAASADELR ENLRAESSDF YVPKVDWKHT SRRVLTLQWV EGTPIYRVDE 240
  241 LQNKELLAKN LIIAFCNQVY RDGFFHADMH PGNLMVDANS RIIVVDFGIM GRLDEETCFY 300
  301 ITEILVGFIN RDYRRVAAAH FDAGYVPERF DQFVTACRSI WEPIADVDDT KNFSTASLLA 360
  361 QLFKITADFD MCVQPKLLLL QKSMVLVEGI CRQLVPEMNF WKIAELWVKD HYENIGYVER 420
  421 LKQCKAYRSM MNIGLLVSKI DRSLDIVISH GQAANARKSG GITKSTFCLT LVIAFLTLII 480
  481 LFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle