YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88598085, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVERIVGR KSVSALVIFC TILCVPFQAF SHESTDNFKS KNRLYFAGTY KISVPNFGSL  60
   61 EVEESNSHVP NVGTVLRKSM KGNVLVNTGK HKSFDAYYKE EFYSNDYFGF SGSIGYAINN 120
  121 FRIEVEGMNS EFKIKAGKGS VHKDDAFYIA LVRERTISNN NYVVVKNKSV AVTSVALSLC 180
  181 YDIKSLSDIV ISYLCFGVSG NAVDLLETRK LTHGYYGRIG AGFLVTRDIL LSVGGYYHRL 240
  241 HANEFSGLKL FIPAATAREM RPAPTSAHAK MDIAYLGVEM SLRYSF

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	286	0.99