YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88606951, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPMIGMGV MGLGIVFVVV AVVGVIRLPD FYSRVHAASI LDSLGMILIC LGLAMQYGFS  60
   61 VFTLKTLVLI CLLLITNTTI CGILTGAACN SKENDGSDSL DVF

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.52
Transmembrane Helix	6	28	0.90
Cytoplasmic	29	36	0.47
Transmembrane Helix	37	59	0.88
Non-Cytoplasmic	60	65	0.42
Transmembrane Helix	66	89	0.86
Cytoplasmic	90	103	0.54