YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_ANAPZ
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLEQFKVV RLLEIPMPFG MDISFTNCAL FMILASLVSA VLLCCALRKR TDGSSSMSHT  60
   61 AVELIYNFVV GAIESNAGVG GLRYIPFVLS IFLFVLACNI IGILPLGFTA TSHVSVTLAL 120
  121 SVVVCASVTV LGFNHQGLHF LRIFLPEGTP LWLAPMMVFI KLFAYLARPV SLAIRLAANM 180
  181 IAGHTIIAVI AEFVLKMHPV LAPLPFAFIM VLIAFEIFVA ILQAYIFTVL TTVYLSDAVA 240
  241 GH

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.89
Transmembrane Helix	23	47	0.88
Cytoplasmic	48	63	0.73
Transmembrane Helix	64	78	0.51
Non-Cytoplasmic	79	83	0.40
Transmembrane Helix	84	108	0.84
Cytoplasmic	109	113	0.48
Transmembrane Helix	114	135	0.89
Non-Cytoplasmic	136	142	0.48
Transmembrane Helix	143	165	0.80
Cytoplasmic	166	171	0.47
Transmembrane Helix	172	195	0.82
Non-Cytoplasmic	196	203	0.44
Transmembrane Helix	204	229	0.83
Cytoplasmic	230	242	0.49