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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88597925, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTGIESI LIIGAGPIVI GQACEFDYSG TQACKVLREE GYRTILVNSN PATIMTDPDL  60
   61 ADSTYIEPIT ANFIEQIIIK EKPDALLATV GGQTVLNVAL ELFDKGVLSE HNVEMIGTNH 120
  121 TAIRKAEDRG LFREAVHKVG AKCPKSVIIR QGDPIAPALE YIGLPAIIRP SFTLGGIGGG 180
  181 IATTEAEFYA AVERGFVMSP TSEVQVDESI IGWKEFEMEV MRDCRDNCIV VCSIENIDPM 240
  241 GVHTGDSITV APALTLRDEE YQKMRNISFD ILREIGVETG GSNVQFAVNP QRDGEIVVIE 300
  301 MNPRVSRSSA LASKATGFPI AKIAAKLAVG YTLDEIVNDC AISIPASFEP VMDYVVVKIP 360
  361 RFDFAKFRVP DQALSTSMKS VGEVMAIGRS LPEALQKALC SLEVGYTGLN EVFDENTCIE 420
  421 HVYKELANPS PGRILMIADA IRMGVSSQKI NEITCYDPWF IQQISRIIAC ESDIKQNGLP 480
  481 TTKEDLLYLK KMGFSDARLA ELGNVSVDYV EDLRQKLSVN PVYKRIDTCA GEFRTNTAYM 540
  541 YGCYEGDSIN TPECESHVTA KEKVIILGSG PNRVGQGIEF DYTCVHAAFT VKQLGLEAIM 600
  601 INCNPETVST DYDISDRLYF SPVSRECVLD IIRNESQGAA SVKVIVQLGG QTPLKLAKIL 660
  661 KEKAVHVIGT DFESIDLAED RMKFKGLLQS LGLKQPRSIT CVTAEEVLRK VEEVGYPVLL 720
  721 RPSYVIGGQF MSVVRDRSAL SSYLHINKNV FDTGCLLIDE FLNDAVEVDV DAICDGDNVY 780
  781 IAGIMEHVEE AGIHSGDSAC SLPYYTLGKE IVDLIAECTK KVASALNVRG LLNIQYAIKD 840
  841 KELYVLEVNP RASRTVPFIA KASGVPVAKI ATSVMLGNKL SIDQEINEMP YTAVKEAVFS 900
  901 FSRFASADPL LGPEMKSTGE VMGIDETFGM AFLKSQAAAG YELPTSGKVF ISVKNSDKPA 960
  961 AAVLAKKLIA LGFEVLSTKG TNNYFNELNI PSTHVNKVRE GSTHIVDMLN NNEISLVINT1020
 1021 SEGIKTISDS ADIRRTAMMK KIPHSTTLAA AKATVISLEE LAAGRTPKVI PVREYHEKNR1080
 1081 HRRKAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle