YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88597874, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPELPEVEVI ARSLADKIIG QRIRDVEVKR RDLRVRIADD FEQLVTGREI CSVYRVAKYL  60
   61 VMQLDSGAKL VFHMGMSGRI LYMHAPVPEK HDCVVFAMQH GYSLVFNDTR RFGLVTLLDG 120
  121 EGYRSLLEKM GPDPFSEAFN ADCLLNMHGK ARIKSVLMNS AVVVGIGNIY ASEILFTAAI 180
  181 LPHREVSTLS REECCRIVES TREVLKLAIA TGGSSIRDYR TPTGDVGNFS KHFRVYGRKG 240
  241 EKCYTCGGEI QVEKQGGRST FFCRHCQK

Type	Start	End	Confidence
Cytoplasmic	1	155	0.53
Transmembrane Helix	156	180	0.48
Non-Cytoplasmic	181	268	0.98