YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RSMA_ANAPZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITKYRTKK SLGQCFILDP AIAEKIVSYA GCLEQYNVIE VGPGLGIMTQ SILNKEVRRL  60
   61 TAIEKDRRLS NIHSKLKEAH AEYDCIFEDI LDVNIEQLLS QSPLKMISNL PYNISVILLL 120
  121 KLLPYIHRFE KLILMFQKEV ADRIVAQPNT KSYSILSILV QLLCDVRKVE DFPPEIFSPS 180
  181 PKVYSSVIEI TPLLSPRFSV DNSYFAQVLK KLFHCRRKTI RNSLKSCIKD ADALFIGCNI 240
  241 DPNARAESLT IEQLCSLTNA LKARNINII

Type	Start	End	Confidence
Signal Peptide	1	23	0.84
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	269	0.98