YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_ANAPZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVTVLGAGA FGTALSVALY NSCCSVALWS RNKRVLEELR NTGMNSLYLP GCLVPKEIEL  60
   61 IPDVESALKC ASVLLLCVPT QELRNLCNDV RNTAALDASV PVLVCSKGIE NKSLKFAGEV 120
  121 IEELLPDNPV FVLSGPALAK EMVRGLPCAM VLAGRDESLA ASLAEKLSSA VMSIAPSTDY 180
  181 VGVQIGSVLK NIIAIACGIV IGKGLGYNAS AMVVVRGIAE IQAVSTAKSE SVDLSTIIGL 240
  241 ACLGDLVLTC TSASSRNMSF GLAIGKGQDI ASRNDSLVEG AESAQSIDRL SNTLGIHLPV 300
  301 CSAIAKLLRG ELDTDQVINQ LLFA

Type	Start	End	Confidence
Signal Peptide	1	24	0.85
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	324	0.95