YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74203925, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLLTLLGP AGRVSTRLRP LAPWLLGTAT SCAQPLWALA LSHPVPDARL LRTARGDCLS  60
   61 RQEPNRTPEP GGSVTGTEKK LSRTQQLKKV FQEYGAVGVS MHIGISLVSL GIFYTVVSSG 120
  121 IDMSAILLKL GFKESLVQSK MAAGTSTFVV AYAIHKLFAP VRISITLVSV PFVVRYFRSV 180
  181 GLFKPPATKP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.75
Transmembrane Helix	21	41	0.72
Non-Cytoplasmic	42	100	0.86
Transmembrane Helix	101	121	0.77
Cytoplasmic	122	135	0.63
Transmembrane Helix	136	155	0.58
Non-Cytoplasmic	156	160	0.46
Transmembrane Helix	161	177	0.51
Cytoplasmic	178	190	0.54