YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87619697
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVGLRASY HRVLSQIEHF LPAKLRPIYN HPAGPKTVFF WAPMFKWSLV IAGLADMTRP  60
   61 AEKLSPSQSA VLTATGLVWS RYSLVIIPKN WNLFAVNFFV GCAGGSQLFR IWKFKQEQKA 120
  121 KKTAEA

Type	Start	End	Confidence
Cytoplasmic	1	66	0.50
Transmembrane Helix	67	85	0.58
Non-Cytoplasmic	86	92	0.75
Transmembrane Helix	93	112	0.88
Cytoplasmic	113	126	0.86